Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs10405978 chr19:54032728 C/T 4.37E-5 527 40.57 40 11.83 KM Plot
KIRC rs10406622 chr19:54029783 A/G 3.09E-5 524 39.17 44.93 19.27 KM Plot
KIRC rs1045537 chr6:26096748 G/C 1.31E-8 510 41 36.28 3.37 KM Plot
KIRC rs10486185 chr7:7732978 G/A 5.83E-5 527 38.47 48.48 5.47 KM Plot
KIRC rs10492383 chr12:29528595 C/T 5.92E-8 524 40.57 39.47 6.07 KM Plot
KIRC rs10497322 chr2:168093279 C/G 4.09E-8 524 40 32.42 3.37 KM Plot
KIRC rs10560614 chr2:67532318 AAT/A 1.98E-7 523 39.85 37.73 2.03 KM Plot
KIRC rs10806915 chr6:20285344 A/G 1.49E-13 527 3.67 36.1 43.02 KM Plot
KIRC rs10815465 chr9:6714127 A/T 3.22E-5 518 40.57 42.67 20.67 KM Plot
KIRC rs10823131 chr10:69846367 A/G 3.66E-5 512 37.7 48.95 17.68 KM Plot
KIRC rs10946377 chr6:20288171 A/T 9.0E-9 525 9.02 35.77 43.3 KM Plot
KIRC rs10975781 chr9:6711543 A/G 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs10975782 chr9:6711625 C/T 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs10975783 chr9:6711921 T/G 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs10975784 chr9:6711999 A/G 2.02E-5 526 40.57 42.67 20.67 KM Plot